Can not run geocat 1.0b

luthfi_a
Posts: 17
Joined: Thu May 21, 2020 5:08 pm

Can not run geocat 1.0b

Post by luthfi_a »

Hi All,
I have GEOCAT 1.0b on Ubuntu 18.04.
When I run geocat_l2.bash, it didn't work with error message like "code for hash md5 was not found". It seems there is problem with opensll. I have openssl 1.1.1 installed but I guess it requires openssl1.0.0. Trying to install openssl1.0.0 doesn't work and installed version is still recognized as version 1.1.1.

Does anyone have any suggestion? I wonder to use older version of Ubuntu to have openssl1.0.0 installed by default.

Thank you and best regards.
Luthfi
jbraun
Posts: 85
Joined: Thu Sep 18, 2014 11:25 am

Re: Can not run geocat 1.0b

Post by jbraun »

Hello Luthfi,

Can you tell us what version of the GEOCAT beta you are running? We'd like to confirm you have the latest beta package available. You can get the version by running:

Code: Select all

geocat_l2.bash --version
We think you might not be running the latest beta. If your version is not 1.0.3b, we recommend you update to the latest beta version and try running the software. You can download the following files (with associated sha1 files for confirmation of a complete download) for CSPP Geo GEOCAT Version 1.0.3beta:


ftp://ftp.ssec.wisc.edu/pub/CSPP/hidden ... .3b.tar.gz

ftp://ftp.ssec.wisc.edu/pub/CSPP/hidden ... ar.gz.sha1

ftp://ftp.ssec.wisc.edu/pub/CSPP/hidden ... .3b.tar.gz

ftp://ftp.ssec.wisc.edu/pub/CSPP/hidden ... ar.gz.sha1

You should use the following install instructions instead to correlate with the updated tar file:

Code: Select all

tar xf cspp-geo-geocat-1.0.3b.tar.gz

export CSPP_GEO_GEOCAT_HOME=$PWD/cspp-geo-geocat-1.0.3b

source $CSPP_GEO_GEOCAT_HOME/geocat_env.sh
The associated test data tar file contains input and reference output files. Here is an example to run a test case after you have installed GEOCAT and completed your setup:

Code: Select all

cd cspp-geo-geocat-test-data-1.0.3b

mkdir work

geocat_l2.sh --satellite him8 -W work inputs/hsd
Thanks,
~Jess
luthfi_a
Posts: 17
Joined: Thu May 21, 2020 5:08 pm

Re: Can not run geocat 1.0b

Post by luthfi_a »

Hi Jess,

Thank you for your answer. I followed your instruction to use the latest version of geocat (1.0.3b) and work with test data. Previously I worked with older version of geocat (1.0b). When running the script to himawari data with the new software, unfortunately I got error message. I copied part of the log file as follows:

2020-06-01 23:16:27.970 (INFO) : Total dynamic ancillary ingest and conversion took 0 days, 0 hours, 13 minutes, 3.360806 seconds
2020-06-01 23:16:27.973 (INFO) : Ancillary staged, 7 files provided
2020-06-01 23:16:27.974 (INFO) : Executing geocat for the area file HS_H08_20190326_2130_B05_FLDK_R20_S0110.DAT ...
2020-06-01 23:16:28.033 (INFO) : There are 1 available CPUs
2020-06-01 23:16:28.033 (INFO) : We have requested 4 CPUs
2020-06-01 23:16:28.034 (WARNING) : 4 requested CPUs is created than available, using 1
2020-06-01 23:16:28.034 (INFO) : We are using 1/1 available CPUs
2020-06-01 23:16:28.653 (INFO) : Submitting 4 image segments to the pool...
2020-06-01 23:16:40.813 (ERROR) : geocat: loadlocale.c:129: _nl_intern_locale_data: Assertion `cnt < (sizeof (_nl_value_type_LC_TIME) / sizeof (_nl_value_type_LC_TIME[0]))' failed.
2020-06-01 23:16:40.834 (ERROR) :
2020-06-01 23:16:40.845 (ERROR) : Program received signal SIGABRT: Process abort signal.
2020-06-01 23:16:40.857 (ERROR) :
2020-06-01 23:16:40.868 (ERROR) : Backtrace for this error:
2020-06-01 23:16:43.776 (ERROR) : #0 0x6ab7e0 in ???
2020-06-01 23:16:43.792 (ERROR) : #1 0x6aaf65 in ???
2020-06-01 23:16:43.838 (ERROR) : geocat: loadlocale.c:129: _nl_intern_locale_data: Assertion `cnt < (sizeof (_nl_value_type_LC_TIME) / sizeof (_nl_value_type_LC_TIME[0]))' failed.
2020-06-01 23:16:43.849 (ERROR) :
2020-06-01 23:16:43.860 (ERROR) : Program received signal SIGABRT: Process abort signal.
2020-06-01 23:16:43.872 (ERROR) :
2020-06-01 23:16:43.883 (ERROR) : Backtrace for this error:
2020-06-01 23:16:43.904 (ERROR) : geocat: loadlocale.c:129: _nl_intern_locale_data: Assertion `cnt < (sizeof (_nl_value_type_LC_TIME) / sizeof (_nl_value_type_LC_TIME[0]))' failed.
2020-06-01 23:16:43.915 (ERROR) :
2020-06-01 23:16:43.932 (ERROR) : geocat: loadlocale.c:129: _nl_intern_locale_data: Assertion `cnt < (sizeof (_nl_value_type_LC_TIME) / sizeof (_nl_value_type_LC_TIME[0]))' failed.
2020-06-01 23:16:43.943 (ERROR) :
2020-06-01 23:16:43.954 (ERROR) : Program received signal SIGABRT: Process abort signal.
2020-06-01 23:16:43.974 (INFO) : geocat execution of HS_H08_20190326_2130_B05_FLDK_R20_S0110.DAT took 0 days, 0 hours, 0 minutes, 15.940450 seconds
2020-06-01 23:16:43.975 (WARNING) : Conversion attempt 1 failed, trying again...
2020-06-01 23:16:48.980 (WARNING) : Conversion attempt 2 failed, trying again...
2020-06-01 23:16:53.987 (WARNING) : Conversion attempt 3 failed, trying again...
2020-06-01 23:16:58.994 (ERROR) : Maximum of 3 conversion attempts reached.
2020-06-01 23:16:58.994 (WARNING) : HDF4 files were not converted to NetCDF4 for : []

Could you please help with more advice? fyi I work on a system with 1 core CPU. Thank you very much in advance.

Best regards,
Luthfi
geoffc
Posts: 34
Joined: Mon Feb 14, 2011 3:02 pm
Location: Madison, WI
Contact:

Re: Can not run geocat 1.0b

Post by geoffc »

Could you try running

Code: Select all

export LC_ALL=C
before you run geocat? Try something like

Code: Select all

export LC_ALL=C ; geocat_l2.sh --satellite him8 -W work inputs/hsd
and let us know how that goes. For reference...
https://askubuntu.com/questions/1081901 ... adlocale-c
Geoff P. Cureton, PhD
Cooperative Institute for Meteorological Satellite Studies
University of Wisconsin-Madison
1225 W. Dayton St.
Madison WI 53706, USA
Phone: +1 608 890 0706
luthfi_a
Posts: 17
Joined: Thu May 21, 2020 5:08 pm

Re: Can not run geocat 1.0b

Post by luthfi_a »

Thank you for the advice. I've written "export LC_ALL=C" before running geocat. I use all himawari sample data as input.
It seems not going well. Here is the list of files created in work directory:

cspp_geocat_l2.2020-06-02T22:21:45.711502.log
geocat_HS_H08_20190326_2130_B05_FLDK_R20_S0110.DAT_run_0
geocat_HS_H08_20190326_2130_B05_FLDK_R20_S0110.DAT_run_0_seg_0_2020-06-02T22:34:19.175483.log
geocat_HS_H08_20190326_2130_B05_FLDK_R20_S0110.DAT_run_0_seg_1_2020-06-02T22:34:19.175483.log
geocat_HS_H08_20190326_2130_B05_FLDK_R20_S0110.DAT_run_0_seg_2_2020-06-02T22:34:19.175483.log
geocat_HS_H08_20190326_2130_B05_FLDK_R20_S0110.DAT_run_0_seg_3_2020-06-02T22:34:19.175483.log
geocat_HS_H08_20190326_2130_B05_JP01_R20_S0101.DAT_run_0_seg_0_2020-06-02T22:42:01.888530.log
geocat_HS_H08_20190326_2130_B05_JP01_R20_S0101.DAT_run_0_seg_1_2020-06-02T22:42:01.888530.log
geocat_HS_H08_20190326_2130_B05_JP01_R20_S0101.DAT_run_0_seg_2_2020-06-02T22:42:01.888530.log
geocat_HS_H08_20190326_2130_B05_JP01_R20_S0101.DAT_run_0_seg_3_2020-06-02T22:42:01.888530.log
geocat_HS_H08_20190326_2130_B05_R301_R20_S0101.DAT_run_0_seg_0_2020-06-02T22:45:03.291033.log
geocat_HS_H08_20190326_2130_B05_R301_R20_S0101.DAT_run_0_seg_1_2020-06-02T22:45:03.291033.log
geocat_HS_H08_20190326_2130_B05_R301_R20_S0101.DAT_run_0_seg_2_2020-06-02T22:45:03.291033.log
geocat_HS_H08_20190326_2130_B05_R301_R20_S0101.DAT_run_0_seg_3_2020-06-02T22:45:03.291033.log
geocatL1.HIMAWARI-8.2019085.213000.JP01.R20.nc
geocatL1.HIMAWARI-8.2019085.213000.R301.R20.nc
geocatL2.HIMAWARI-8.2019085.213000.JP01.R20.nc
geocatL2.HIMAWARI-8.2019085.213000.R301.R20.nc

There are some errors and warning:
2020-06-02 22:21:46.409 (INFO) : We are using 1/1 available CPUs
2020-06-02 22:21:46.473 (INFO) : Submitting 4 image segments to the pool...
2020-06-02 22:25:56.542 (ERROR) : Killed
2020-06-02 22:28:59.232 (ERROR) : Killed
2020-06-02 22:34:13.092 (ERROR) : Killed
2020-06-02 22:34:17.690 (INFO) : geocat execution of HS_H08_20190326_2130_B05_FLDK_R20_S0110.DAT took 0 days, 0 hours, 12 minutes, 30.076983 seconds
2020-06-02 22:34:23.604 (WARNING) : Size of HDF4 file geocatL1.HIMAWARI-8.2019085.213000.hdf is too small, possible geocat problem
2020-06-02 22:34:23.611 (WARNING) : Removing possibly corrupted HDF4 file geocatL1.HIMAWARI-8.2019085.213000.hdf from the cache.
2020-06-02 22:34:23.705 (WARNING) : Size of HDF4 file geocatL2.HIMAWARI-8.2019085.213000.hdf is too small, possible geocat problem
2020-06-02 22:34:23.705 (WARNING) : Removing possibly corrupted HDF4 file geocatL2.HIMAWARI-8.2019085.213000.hdf from the cache.
2020-06-02 22:34:24.089 (WARNING) : Size of HDF4 file geocatL1.HIMAWARI-8.2019085.213000.hdf is too small, possible geocat problem
2020-06-02 22:34:24.090 (WARNING) : Removing possibly corrupted HDF4 file geocatL1.HIMAWARI-8.2019085.213000.hdf from the cache.
2020-06-02 22:34:24.114 (WARNING) : Size of HDF4 file geocatL2.HIMAWARI-8.2019085.213000.hdf is too small, possible geocat problem
2020-06-02 22:34:24.115 (WARNING) : Removing possibly corrupted HDF4 file geocatL2.HIMAWARI-8.2019085.213000.hdf from the cache.
2020-06-02 22:34:24.235 (WARNING) : Size of HDF4 file geocatL1.HIMAWARI-8.2019085.213000.hdf is too small, possible geocat problem
2020-06-02 22:34:24.236 (WARNING) : Removing possibly corrupted HDF4 file geocatL1.HIMAWARI-8.2019085.213000.hdf from the cache.
2020-06-02 22:34:24.236 (WARNING) : Size of HDF4 file geocatL2.HIMAWARI-8.2019085.213000.hdf is too small, possible geocat problem
2020-06-02 22:34:24.237 (WARNING) : Removing possibly corrupted HDF4 file geocatL2.HIMAWARI-8.2019085.213000.hdf from the cache.
2020-06-02 22:34:24.270 (WARNING) : Size of HDF4 file geocatL1.HIMAWARI-8.2019085.213000.hdf is too small, possible geocat problem
2020-06-02 22:34:24.271 (WARNING) : Removing possibly corrupted HDF4 file geocatL1.HIMAWARI-8.2019085.213000.hdf from the cache.
2020-06-02 22:34:24.272 (WARNING) : Size of HDF4 file geocatL2.HIMAWARI-8.2019085.213000.hdf is too small, possible geocat problem
2020-06-02 22:34:24.272 (WARNING) : Removing possibly corrupted HDF4 file geocatL2.HIMAWARI-8.2019085.213000.hdf from the cache.
2020-06-02 22:34:32.312 (ERROR) : Execution of geocat failed to complete for segment 0
2020-06-02 22:34:32.313 (ERROR) : Execution of geocat failed to complete for segment 1
2020-06-02 22:34:32.314 (ERROR) : Execution of geocat failed to complete for segment 2
2020-06-02 22:34:32.315 (ERROR) : Execution of geocat failed to complete for segment 3
2020-06-02 22:34:32.315 (ERROR) : geocat output HDF4 file may be corrupted for segment 0
2020-06-02 22:34:32.316 (ERROR) : geocat output HDF4 file may be corrupted for segment 1
2020-06-02 22:34:32.316 (ERROR) : geocat output HDF4 file may be corrupted for segment 2
2020-06-02 22:34:32.317 (ERROR) : geocat output HDF4 file may be corrupted for segment 3
2020-06-02 22:34:32.758 (INFO) : >>> Completed processing area file HS_H08_20190326_2130_B05_FLDK_R20_S0110.DAT

Reading log file for FLDK:
2020-06-02 22:25:46.312 (INFO) : geocat>> Creating Level 1 file:
2020-06-02 22:25:46.312 (INFO) : ./geocat_hdf/HS_H08_20190326_2130_B05_FLDK_R20_S0110_seg_0/geocatL1.HIMAWARI-8.2019085.213000.hdf
2020-06-02 22:25:46.373 (INFO) :
2020-06-02 22:25:46.380 (INFO) : geocat>> Creating Level 2 file:
2020-06-02 22:25:46.380 (INFO) : ./geocat_hdf/HS_H08_20190326_2130_B05_FLDK_R20_S0110_seg_0/geocatL2.HIMAWARI-8.2019085.213000.hdf
2020-06-02 22:25:52.757 (ERROR) : Killed

Reading log file for JP01
2020-06-02 22:37:58.515 (INFO) : geocat>> SYSTEM_BRIDGE_FOG_SERVICES:READ_FOG_DETECTION_CONFIG(INFORMATION) : Reading fog detection configuration from: ./data_algorithms/fog_detection/config//fog_detection_HIMAWARI8.config
2020-06-02 22:37:59.805 (INFO) : geocat>> FOG_DETECTION:goesr_fog_detection_bridge(INFORMATION) : Reading in meso fog LUTs, Bayes_fogprob_RAP_luts_GOESNov5_2013_171801.hdf
2020-06-02 22:38:01.270 (INFO) : geocat>> FOG_DETECTION:goesr_fog_detection_bridge(INFORMATION) : Reading in meso radiation fog LUTs, Bayes_fogprob_RAP_rad_luts_GOESNov5_2013_171801.hdf
2020-06-02 22:38:02.048 (INFO) : geocat>> FOG_DETECTION:goesr_fog_detection_bridge(INFORMATION) : Reading in global fog LUT, Bayes_fogprob_GFS_luts_GOESMay10_2012_145852.hdf
2020-06-02 22:38:02.162 (INFO) : geocat>> FOG_DETECTION:goesr_fog_detection_bridge(INFORMATION) : Reading in global radiation fog LUTs, Bayes_fogprob_GFS_rad_luts_GOESMay10_2012_145852.hdf
2020-06-02 22:38:03.837 (INFO) : geocat>> FOG_DETECTION:goesr_fog_detection_bridge(INFORMATION) : Finished reading fog LUTs
2020-06-02 22:38:03.838 (INFO) : geocat>> SYSTEM_BRIDGE_FOG_SERVICES:Have_Fog_Temporal_Data(FAILURE) : Error reading in 1st IFR Fog Prob temporal data
2020-06-02 22:38:03.839 (INFO) : geocat>> SYSTEM_BRIDGE_FOG_SERVICES:Have_Fog_Temporal_Data(FAILURE) : Error reading in 1st LIFR Fog Prob temporal data
2020-06-02 22:38:03.839 (INFO) : geocat>> SYSTEM_BRIDGE_FOG_SERVICES:Have_Fog_Temporal_Data(FAILURE) : Error reading in 1st MVFR Fog Prob temporal data
2020-06-02 22:38:03.839 (INFO) : geocat>> SYSTEM_BRIDGE_FOG_SERVICES:Have_Fog_Temporal_Data(FAILURE) : Error reading in 1st Ems7 Composite temporal data
2020-06-02 22:38:03.841 (INFO) : geocat>> SYSTEM_BRIDGE_FOG_SERVICES:Have_Fog_Temporal_Data(FAILURE) : Error reading in 1st Ref7 Composite temporal data
2020-06-02 22:38:03.841 (INFO) : geocat>> SYSTEM_BRIDGE_FOG_SERVICES:Have_Fog_Temporal_Data(FAILURE) : Error reading in 1st Ref2 StdDev Composite temporal data
2020-06-02 22:38:03.841 (INFO) : geocat>> SYSTEM_BRIDGE_FOG_SERVICES:Have_Fog_Temporal_Data(FAILURE) : Error reading in 1st Cloud Type temporal data
2020-06-02 22:38:03.841 (INFO) : geocat>> SYSTEM_BRIDGE_FOG_SERVICES:Have_Fog_Temporal_Data(INFORMATION) : Temporal Fog Probability Data NOT Available
2020-06-02 22:38:07.806 (INFO) : geocat>> FOG_DETECTION:goesr_fog_detection_bridge(INFORMATION) : Deallocating MESO fog LUT's
2020-06-02 22:38:07.806 (INFO) : geocat>> FOG_DETECTION:goesr_fog_detection_bridge(INFORMATION) : Deallocating GLOBAL fog LUT's

Reading log file for R301 looks the same with JP01
SYSTEM_BRIDGE_FOG_SERVICES:READ_FOG_DETECTION_CONFIG(INFORMATION) : Reading fog detection configuration from: ./data_algorithms/fog_detection/config//fog_detection_HIMAWARI8.config
2020-06-02 22:43:48.420 (INFO) : geocat>> FOG_DETECTION:goesr_fog_detection_bridge(INFORMATION) : Reading in meso fog LUTs, Bayes_fogprob_RAP_luts_GOESNov5_2013_171801.hdf
2020-06-02 22:43:48.420 (INFO) : geocat>> FOG_DETECTION:goesr_fog_detection_bridge(INFORMATION) : Reading in meso radiation fog LUTs, Bayes_fogprob_RAP_rad_luts_GOESNov5_2013_171801.hdf
2020-06-02 22:43:48.422 (INFO) : geocat>> FOG_DETECTION:goesr_fog_detection_bridge(INFORMATION) : Reading in global fog LUT, Bayes_fogprob_GFS_luts_GOESMay10_2012_145852.hdf
2020-06-02 22:43:48.424 (INFO) : geocat>> FOG_DETECTION:goesr_fog_detection_bridge(INFORMATION) : Reading in global radiation fog LUTs, Bayes_fogprob_GFS_rad_luts_GOESMay10_2012_145852.hdf
2020-06-02 22:43:48.426 (INFO) : geocat>> FOG_DETECTION:goesr_fog_detection_bridge(INFORMATION) : Finished reading fog LUTs
2020-06-02 22:43:48.426 (INFO) : geocat>> SYSTEM_BRIDGE_FOG_SERVICES:Have_Fog_Temporal_Data(FAILURE) : Error reading in 1st IFR Fog Prob temporal data
2020-06-02 22:43:48.426 (INFO) : geocat>> SYSTEM_BRIDGE_FOG_SERVICES:Have_Fog_Temporal_Data(FAILURE) : Error reading in 1st LIFR Fog Prob temporal data
2020-06-02 22:43:48.426 (INFO) : geocat>> SYSTEM_BRIDGE_FOG_SERVICES:Have_Fog_Temporal_Data(FAILURE) : Error reading in 1st MVFR Fog Prob temporal data
2020-06-02 22:43:48.428 (INFO) : geocat>> SYSTEM_BRIDGE_FOG_SERVICES:Have_Fog_Temporal_Data(FAILURE) : Error reading in 1st Ems7 Composite temporal data
2020-06-02 22:43:48.428 (INFO) : geocat>> SYSTEM_BRIDGE_FOG_SERVICES:Have_Fog_Temporal_Data(FAILURE) : Error reading in 1st Ref7 Composite temporal data
2020-06-02 22:43:48.428 (INFO) : geocat>> SYSTEM_BRIDGE_FOG_SERVICES:Have_Fog_Temporal_Data(FAILURE) : Error reading in 1st Ref2 StdDev Composite temporal data
2020-06-02 22:43:48.428 (INFO) : geocat>> SYSTEM_BRIDGE_FOG_SERVICES:Have_Fog_Temporal_Data(FAILURE) : Error reading in 1st Cloud Type temporal data
2020-06-02 22:43:48.428 (INFO) : geocat>> SYSTEM_BRIDGE_FOG_SERVICES:Have_Fog_Temporal_Data(INFORMATION) : Temporal Fog Probability Data NOT Available
2020-06-02 22:43:49.128 (INFO) : geocat>> FOG_DETECTION:goesr_fog_detection_bridge(INFORMATION) : Deallocating MESO fog LUT's
2020-06-02 22:43:49.128 (INFO) : geocat>> FOG_DETECTION:goesr_fog_detection_bridge(INFORMATION) : Deallocating GLOBAL fog LUT's

I really need help. Thanks.
Best regards,
Luthfi
geoffc
Posts: 34
Joined: Mon Feb 14, 2011 3:02 pm
Location: Madison, WI
Contact:

Re: Can not run geocat 1.0b

Post by geoffc »

Hi,
it looks like you might have had some success with the JP01 and R301 runs, can you put the files

Code: Select all

geocatL1.HIMAWARI-8.2019085.213000.JP01.R20.nc
geocatL1.HIMAWARI-8.2019085.213000.R301.R20.nc
geocatL2.HIMAWARI-8.2019085.213000.JP01.R20.nc
geocatL2.HIMAWARI-8.2019085.213000.R301.R20.nc
and their associated log files, into a tarball, and upload it to ftp.ssec.wisc.edu/pub/incoming

Can you also include the cspp_geocat_l2*.log file.

Thanks,
Geoff
Geoff P. Cureton, PhD
Cooperative Institute for Meteorological Satellite Studies
University of Wisconsin-Madison
1225 W. Dayton St.
Madison WI 53706, USA
Phone: +1 608 890 0706
geoffc
Posts: 34
Joined: Mon Feb 14, 2011 3:02 pm
Location: Madison, WI
Contact:

Re: Can not run geocat 1.0b

Post by geoffc »

Also, could you try for the full disk:

Code: Select all

export LC_ALL=C ; geocat_l2.sh --satellite him8 -W work inputs/hsd/geocat_HS_H08_20190326_2130_B05_FLDK_R20_S0110.DAT--num_cpu 1 --viewport_xy 100 200 100 200
where

Code: Select all

--viewport_xy YSTART YEND XSTART XEND
                      Starting and ending lines [*ystart*, *yend*], and
                      starting and ending elements with stride [*ystart*,
                      *yend*, *xstride*], of the projection viewport.
selects a 100x100 rectangular region to process, in terms of the columns ("Y") and rows ("X") of the image. Because the full disk is so large, I wonder whether you're running out of memory, processing a small segment might be instructive.

Geoff
Geoff P. Cureton, PhD
Cooperative Institute for Meteorological Satellite Studies
University of Wisconsin-Madison
1225 W. Dayton St.
Madison WI 53706, USA
Phone: +1 608 890 0706
luthfi_a
Posts: 17
Joined: Thu May 21, 2020 5:08 pm

Re: Can not run geocat 1.0b

Post by luthfi_a »

Hi, I got progress with FLDK file. But still, it was not working as expected.
I proceed with one HSD file to follow your suggestion:

luthfi@ubuntu:~/Desktop$ geocat_l2.sh --satellite him8 /home/luthfi/Desktop/work2 /home/luthfi/Desktop/hsd/HS_H08_20190326_2130_B06_FLDK_R20_S0110.DAT --num_cpu 1 --viewport_xy 100 200 100 200

I expect to have the result in work2 directory, but the product was stored in my working directory (./Desktop). I tested channel 06 data to differentiate with previous trial, but the software read channel 05 as input. I'm not sure, probably there is temporary or cache file need to be cleaned. I copied the product files to luthfi_a_geocat_B06.tar (uploaded to ftp), and I have uploaded product file for JP01 and R301 from previous trial as luthfi_a_geocat_B05.tar.

I still need your suggestion. Thank you for your kind help.
Luthfi
geoffc
Posts: 34
Joined: Mon Feb 14, 2011 3:02 pm
Location: Madison, WI
Contact:

Re: Can not run geocat 1.0b

Post by geoffc »

Hi,
in order to use a particular directory as a working directory, you need to use the "-W" or "--work_dir" switches:

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-W work_dir, --work-dir work_dir
                      work directory which all activity will occur in,
                      defaults to current dir
So your invocation should have read...

Code: Select all

luthfi@ubuntu:~/Desktop$ geocat_l2.sh --satellite him8 -W /home/luthfi/Desktop/work2 /home/luthfi/Desktop/hsd/HS_H08_20190326_2130_B06_FLDK_R20_S0110.DAT --num_cpu 1 --viewport_xy 100 200 100 200
In order to see the available options, run

Code: Select all

geocat_l2.sh -h
I will take a look at the files you uploaded.

Thanks,
Geoff
Geoff P. Cureton, PhD
Cooperative Institute for Meteorological Satellite Studies
University of Wisconsin-Madison
1225 W. Dayton St.
Madison WI 53706, USA
Phone: +1 608 890 0706
geoffc
Posts: 34
Joined: Mon Feb 14, 2011 3:02 pm
Location: Madison, WI
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Re: Can not run geocat 1.0b

Post by geoffc »

It looks like your JP01 and R301 runs were successful (I was able to plot the results of the Level-1 and Level-2 files.

According to the log files, the FLDK run (with the "--viewport_xy 100 200 100 200" setting) completed successfully. However the output NetCF files (geocatL1.HIMAWARI-8.2019085.213000.FLDK.R20.nc and geocatL2.HIMAWARI-8.2019085.213000.FLDK.R20.nc) were all NaN as far as I could tell.

Could you run the FLDK run again with a larger viewport setting of "--viewport_xy 100 1200 100 1200":

Code: Select all

geocat_l2.sh --satellite him8 -W /home/luthfi/Desktop/work2 /home/luthfi/Desktop/hsd/HS_H08_20190326_2130_B06_FLDK_R20_S0110.DAT --num_cpu 1 --viewport_xy 100 1200 100 1200 --line_segments 1 --element_segments 1 -vvv
and send me the contents of you work directory again. Also, be sure to include the files "geocat_hdf/HS_H08_20190326_2130_B05_FLDK_R20_S0110_seg_0/geocatL*.HIMAWARI-8.2019085.213000.hdf". The "geocat_hdf" directory should be inside the cache directory ("/home/luthfi/Desktop/cspp-geo-geocat-1.0.3b/anc/cache/geocat_hdf").

Geoff
Geoff P. Cureton, PhD
Cooperative Institute for Meteorological Satellite Studies
University of Wisconsin-Madison
1225 W. Dayton St.
Madison WI 53706, USA
Phone: +1 608 890 0706
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